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Publications 2018

Year Published
Journal Name
Volume
Article Title
Authors
Name of Research Line
DOI/Identifier
Links
315
2018
Algal Research
30
Assessment of genetic and phenotypic diversity of the giant kelp Macrocystis pyrifera to support breeding programs
Camus Carolina Faugeron Sylvain Buschmann Alejandro H.
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1016/j.algal.2018.01.004
316
2018
AMB Express
8
Effects of limonene ndecane and ndecanol on growth and membrane fatty acid composition of the microalga Botryococcus braunii
Concha E. Heipieper H.J. Wick L.Y. Ciudad G.A. Navia R.
Molecular Genetics Extremophiles and Ecophysiology (MG)
https://doi.org/10.1186/s1356801807189
317
2018
ANNALS OF MICROBIOLOGY
68
Insights into the diversity and metabolic function of bacterial communities in sediments from Chilean salmon aquaculture sites
Hornick KM Buschmann AH
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1007/s1321301713178
318
2018
Annual ACMSIAM Symposium on Discrete Algorithms
2018
OptimalTime Text Indexing in BWTruns Bounded Space
Gagie Travis Navarro Gonzalo Prezza Nicola
Bioinformatics (BI)
319
2018
Antonie van Leeuwenhoek
111
Corrosion of bare carbon steel as a passive sensor to assess moisture availability for biological activity in Atacama Desert soils
Cáceres Luis Davila Alfonso F. Soliz Alvaro Saldivia Jessica
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1007/s1048201810375
https://www.ncbi.nlm.nih.gov/pubmed/29492771
320
2018
Antonie van Leeuwenhoek
111
Metabolic modelling and flux analysis of microorganisms from the Atacama Desert used in biotechnological processes
Razmilic Valeria Castro Jean Franco Marchant Francisca Asenjo Juan A. Andrews Barbara
Metabolomics and Metabolic Engineering (ME)
10.1007/s104820181031y
https://link.springer.com/article/10.1007%2Fs104820181031y
321
2018
Antonie van Leeuwenhoek
111
Microbial community composition and trophic role along a marked salinity gradient in Laguna Puilar Salar de Atacama Chile
Dorador Cristina Fink Patrick Hengst Martha Icaza Gonzalo Villalobos Alvaro S. Vejar Drina Meneses Daniela Zadjelovic Vinko Burmann Lisa Moelzner Jana Harrod Chris
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1007/s104820181091z
https://link.springer.com/article/10.1007/s104820181091z
322
2018
Antonie van Leeuwenhoek
111
Rhodobacter sp. Rb3 an aerobic anoxygenic phototroph which thrives in the polyextreme ecosystem of the Salar de Huasco in the Chilean Altiplano
Pérez Vilma Dorador Cristina Molina Verónica Yáñez Carolina Hengst Martha
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1007/s104820181067z
https://link.springer.com/article/10.1007%2Fs104820181067z
323
2018
Antonie van Leeuwenhoek
111
Distribution of greenhouse gases in hyperarid and arid areas of northern Chile and the contribution of the high altitude wetland microbiome (Salar de Huasco Chile)
Molina Verónica Eissler Yoanna Cornejo Marcela Galand Pierre E. Dorador Cristina Hengst Martha Fernandez Camila. Francois Jean Pierre
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1007/s1048201810789
https://link.springer.com/article/10.1007%2Fs1048201810789
324
2018
Antonie van Leeuwenhoek
111
Subtercola vilae sp. nov. a novel actinobacterium from an extremely highaltitude cold volcano lake in Chile
Villalobos Alvaro S. Wiese Jutta Aguilar Pablo Dorador Cristina Imhoff Johannes F.
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1007/s1048201709944
https://link.springer.com/article/10.1007/s1048201709944
325
2018
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
111
Introducing the Atacama Desert
Bull AT Andrews BA Dorador C Goodfellow M
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1007/s1048201811002
326
2018
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
111
Lithobiontic life: Atacama rocks are well and alive
GómezSilva Benito
Molecular Genetics Extremophiles and Ecophysiology (MG)
DOI 10.1007/s1048201810339
https://link.springer.com/article/10.1007%2Fs1048201810339#citeas
327
2018
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
111
Fungal diversity in the Atacama Desert
Santiago Iara F. Gonçalves Vívian N. GómezSilva Benito Galetovic Alexandra Rosa Luiz H.
Molecular Genetics Extremophiles and Ecophysiology (MG)
https://doi.org/10.1007/s1048201810606
https://link.springer.com/article/10.1007%2Fs1048201810606
328
2018
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
111
The gifted actinomycete Streptomyces leeuwenhoekii
Castro JF Razmilic V GomezEscribano JP Andrews B Asenjo J Bibb M
Metabolomics and Metabolic Engineering (ME)
10.1007/s1048201810348
https://link.springer.com/article/10.1007%2Fs1048201810348
329
2018
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
111
Amycolatopsis vastitatis sp nov. an isolate from a high altitude subsurface soil on Cerro Chajnantor northern Chile
Idris H Nouioui I Pathomaree W Castro JF Bull AT Andrews BA Asenjo JA Goodfellow M
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1007/s1048201810393
https://link.springer.com/article/10.1007%2Fs1048201810393
330
2018
Archive for Rational Mechanics and Analysis
230
The Dispersion Tensor and Its Unique Minimizer in Hashin–Shtrikman Microstructures
B?lilescu Loredana Conca Carlos Ghosh Tuhin San Martín Jorge Vanninathan Muthusamy
Mathematical Modelling (MM)
10.1007/s002050181255z
https://link.springer.com/article/10.1007/s002050181255z
331
2018
BIODATA MINING
11
A multiobjective gene clustering algorithm guided by apriori biological knowledge with intensification and diversification strategies
ParragaAlava J Dorn M InostrozaPonta M
Bioinformatics (BI)
https://doi.org/10.1186/s1304001801784
332
2018
Bioinformatics
34
Practical dynamic de Bruijn graphs
Crawford V.G. Kuhnle A. Boucher C. Chikhi R. Gagie T.
Bioinformatics (BI)
10.1093/bioinformatics/bty500
https://academic.oup.com/bioinformatics/articleabstract/34/24/4189/5043010?redirectedFrom=fulltext
333
2018
Biotechnology and Bioengineering
115
Analysis of metabolic networks of Streptomyces leeuwenhoekii C34 by means of a genome scale model: Prediction of modifications that enhance the production of specialized metabolites
Razmilic Valeria Castro Jean F. Andrews Barbara Asenjo Juan A.
Metabolomics and Metabolic Engineering (ME)
10.1002/bit.26598
https://onlinelibrary.wiley.com/doi/pdf/10.1002/bit.26598
334
2018
BIOTECHNOLOGY JOURNAL
13
Relevance of Local Flexibility Near the Active Site for Enzymatic Catalysis: Biochemical Characterization and Engineering of Cellulase Cel5A From Bacillus agaradherans
Saavedra Juan M. Azócar Mauricio A. Rodríguez Vida RamírezSarmiento César A. Andrews Barbara A. Asenjo Juan A. Parra Loreto P.
Mathematical Modelling (MM) Protein Engineering (PE)
DOI: 10.1002/biot.201700669
https://onlinelibrary.wiley.com/doi/pdf/10.1002/biot.201700669
335
2018
BOTANICA MARINA
62
The seaweed resources of Chile over the period 20062016: moving from gatherers to cultivators
Camus C. HernándezGonzález M.D.C. Buschmann A.H.
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1515/bot20180030
https://doi.org/10.1515/bot20180030
336
2018
Composites Communications
10
The influences of solvents on the electrospun of whole Scenedesmus almeriensis and poly(ethylene oxide) for the preparation of composite nanofibers
Sankaranarayanan Sivashunmugam Hermosilla Jeyson Acevedo Francisca Navia Rodrigo
Molecular Genetics Extremophiles and Ecophysiology (MG)
https://doi.org/10.1016/j.coco.2018.05.003
337
2018
Composites Part B: Engineering
132
Characterization and application of a natural polymer obtained from Hydrangea macrophylla as a thermal insulation biomaterial
Cardenas JP Cea M Santin K Valdes G Hunter R Navia R
Protein Engineering (PE)
10.1016/j.compositesb.2017.07.086
https://www.sciencedirect.com/science/article/pii/S1359836816311155?via%3Dihub#!
338
2018
Conferencia IEEE International Symposium on Biomedical Imaging
xx
Conferencia IEEE International Symposium on Biomedical Imaging
Sanchez C. Hernández C. Poupon J. Mangin P. Guevara
Bioinformatics (BI)
339
2018
Current Vascular Pharmacology
16
Involvement of intracellular pH in vascular insulin resistance.
Ramirez Marco A Beltran Ana R Araya Jorge E Cornejo Marcelo Toledo Fernando Fuentes Gonzalo Sobrevia Luis
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.2174/1570161116666180911104012
http://www.eurekaselect.com/165274/article
340
2018
Data Compression Conference
2018
A Grammar Compression Algorithm based on Induced Suffix Sorting
Saad Daniel Louza Felipe Gog Simon AyalaRincon Mauricio Navarro Gonzalo
Bioinformatics (BI)
341
2018
Data Compression Conference
2018
Compact Representation of Event Sequences
Brisaboa Nieves de Bernardo Guillermo Navarro Gonzalo Rodeiro Tirso Seco Diego
Bioinformatics (BI)
342
2018
ESAIM: Mathematical Modelling and Numerical Analysis
52
DETERMINING THE DISTRIBUTION OF ION CHANNELS FROM EXPERIMENTAL DATA USING THE MELLIN TRANSFORM
Bourgeron Thibault Conca Carlos Lecaros Rodrigo
Mathematical Modelling (MM)
10.1051/m2an/2017062
https://www.esaimm2an.org/articles/m2an/abs/2018/05/m2an160153/m2an160153.html
343
2018
EXTREMOPHILES
22
High altitude hyperarid soils of the CentralAndes harbor megadiverse communities of actinobacteria
Bull AT Idris H Sanderson R Asenjo J Andrews B Goodfellow M
10.1007/s0079201709765
344
2018
FEMS Microbiology Ecology
94
Bacterioplankton composition in tropical highelevation lakes of the Andean plateau
Aguilar Pablo Dorador Cristina Vila Irma Sommaruga Ruben
10.1093/femsec/fiy004
345
2018
FEMS Microbiology Ecology
94
The activity of nitrifying microorganisms in a high altitude Andean wetland
Molina Verónica Dorador Cristina Fernández Camila Bristow Laura Eissler Yoanna Hengst Martha Hernandez Klaudia Olsen Lasse Mork Harrod Chris Marchant Francisca Anguita Cristobal Cornejo Marcela
10.1093/femsec/fiy062
346
2018
FOODS
7
A Microethnographic and Ethnobotanical Approach to Llayta Consumption among Andes Feeding Practices
Rivera M Galetovic A Licuime R GomezSilva B
Molecular Genetics Extremophiles and Ecophysiology (MG)
https://doi.org/10.3390/foods7120202
https://www.mdpi.com/23048158/7/12/202
347
2018
FRONTIERS IN CELLULAR NEUROSCIENCE
12
RCAN1 Knockdown Reverts Defects in the Number of CalciumInduced Exocytotic Events in a Cellular Model of Down Syndrome
VasquezNavarrete Jacqueline Martinez Agustin D. Ory Stephane BaezMatus Ximena GonzalezJamett Arlek M. Brauchi Sebastian Caviedes Pablo Cardenas Ana M.
Metabolomics and Metabolic Engineering (ME)
doi: 10.3389/fncel.2018.00189
348
2018
IEEE Transactions on Information Theory
xx
RePair and All Irreducible Grammars are Upper Bounded by HighOrder Empirical Entropy
Ochoa C. Navarro G.
Bioinformatics (BI)
10.1109/TIT.2018.2871452
https://ieeexplore.ieee.org/document/8469009/footnotes
349
2018
International Journal of Electrochemical Science
13
Influence of hydrodynamic flow patterns on the corrosion behavior of carbon steel in a neutral LiBr solution
Soliz A. Mayrhofer K.J.J. Cáceres L.
Mathematical Modelling (MM)
10.20964/2018.11.08
http://www.electrochemsci.org/papers/vol13/131110050.pdf
350
2018
International Journal of Foundations of Computer Science
29
Bidirectional VariableOrder de Bruijn Graphs
Belazzougui D. Gagie T. Mäkinen V. Previtali M. Puglisi S.J.
Bioinformatics (BI)
10.1142/S0129054118430037
https://www.worldscientific.com/doi/abs/10.1142/S0129054118430037
351
2018
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
68
Blastococcus atacamensis sp nov. a novel strain adapted to life in the Yungay core region of the Atacama Desert
Castro JF Nouioui I Sangal V Choi S Yang SJ Kim BY Trujillo ME Riesco R MonteroCalasanz MD Rahmani TPD Bull AT Sutcliffe IC Asenjo JA Andrews B Goodfellow M
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1099/ijsem.0.002828
https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.002828
352
2018
Journal of Geochemical Exploration
185
Sources enrichment and redistribution of As Cd Cu Li Mo and Sb in the Northern Atacama Region Chile: Implications for arid watersheds affected by mining
Tapia J Davenport J Townley B Dorador C Schneider B Tolorza V von Tumpling W
10.1016/j.gexplo.2017.10.021
353
2018
Journal of Geophysical Research: Biogeosciences
123
Microbial Communities From the World's Largest Lithium Reserve Salar de Atacama Chile: Life at High LiCl Concentrations
Cubillos C.F. Aguilar P. Grágeda M. Dorador C.
Molecular Genetics Extremophiles and Ecophysiology (MG)
https://doi.org/10.1029/2018JG004621
https://agupubs.onlinelibrary.wiley.com/doi/full/10.1029/2018JG004621
354
2018
JOURNAL OF INORGANIC BIOCHEMISTRY
183
An optimized lowcost protocol for standardized production of ironfree apoferritin nanocages with high protein recovery and suitable conformation for nanotechnological applications
Moglia Italo Santiago Margarita OliveraNappa Alvaro Soler Monica
10.1016/j.jinorgbio.2017.11.019
355
2018
Journal of microbiology and biotechnology
28
Saccharification of Brown Macroalgae Using an Arsenal of Recombinant Alginate Lyases: Potential Application in the Biorefinery Process
Gimpel J.A. Ravanal M.C. Salazar O. Lienqueo M.E.
Molecular Genetics Extremophiles and Ecophysiology (MG)
" https://doi.org/10.4014/jmb.1805.05056"
356
2018
Journal of Phycology
54
Nutrients but not genetic diversity affect Gracilaria chilensis (Rhodophyta) farming productivity and physiological responses
Usandizaga S. Camus C. Kappes J.L. Guillemin M.L. Buschmann A.H.
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1111/jpy.12785
357
2018
JOURNAL OF VENOMOUS ANIMALS AND TOXINS INCLUDING TROPICAL DISEASES
24
Heterophilic antibodies in sera from individuals without loxoscelism crossreact with phospholipase D from the venom of Loxosceles and Sicarius spiders
AránSekul Tomás Rojas José M. Subiabre Mario Cruz Victoria Cortés William Osorio Luis González Jorge Araya Jorge E. Catalán Alejandro
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1186/s404090180155x
https://jvat.biomedcentral.com/track/pdf/10.1186/s404090180155x
358
2018
Latin American Theoretical Informatics Conference
2018
On the Approximation Ratio of LempelZiv Parsing
Gagie Travis Navarro Gonzalo Prezza Nicola
359
2018
Leibniz International Proceedings in Informatics LIPIcs
105
Online LZ77 parsing and matching statistics with RLBWTs
Bannai H. Gagie T. Tomohiro I.
Bioinformatics (BI)
10.4230/LIPIcs.CPM.2018.7
https://kyushuu.pure.elsevier.com/en/publications/onlinelz77parsingandmatchingstatisticswithrlbwts
360
2018
London Mathematical Society Newsletter
474
Modelling our sense of smelling
Bourgeron Thibault Conca Carlos Lecaros Rodrigo
361
2018
MARINE ENVIRONMENTAL RESEARCH
135
Photosynthesis and nitrogen uptake of the giant kelp Macrocystis pyrifera (Ochrophyta) grown close to salmon farms
Varela D. A. Figueroa F. Henríquez L. A. Fernández P. A. Leal P. P. HernándezGonzález M. C. Buschmann A. H.
DOI: 10.1016/j.marenvres.2018.02.002
362
2018
Microbial Ecology
76
Microbial Communities of HighElevation Fumaroles Penitentes and Dry Tephra “Soils” of the Puna de Atacama Volcanic Zone
Solon Adam J. Vimercati Lara Darcy J. L. Arán Pablo Porazinska Dorota Dorador C. Farías M. E. Schmidt S. K.
10.1007/s0024801711291
363
2018
MicrobiologyOpen
8
Active microbiome structure and its association with environmental factors and viruses at different aquatic sites of a highaltitude wetland
Eissler Y. Gálvez M.J. Dorador C. Hengst M Molina V.
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.1002/mbo3.667
364
2018
NATURE COMMUNICATIONS
9
Species traits and network structure predict the success and impacts of pollinator invasions
Valdovinos Fernanda S. Berlow Eric L. Moisset de Espanés Pablo RamosJiliberto Rodrigo Vázquez Diego P. Martinez Neo D.
10.1038/s4146701804593y
365
2018
PEERJ
6
Geologic and anthropogenic sources of contamination in settled dust of a historic mining port city in northern Chile: health risk implications
Tapia Joseline S. Valdes Jorge Orrego Rodrigo Tchernitchin Andrei Dorador Cristina Bolados Aliro Harrod Chris
10.7717/peerj.4699
366
2018
Plant Journal
96
Metabolic modelling and simulation of the light and dark metabolism of Chlamydomonas reinhardtii
Shene C. Asenjo J.A. Chisti Y.
Mathematical Modelling (MM)
https://doi.org/10.1111/tpj.14078
367
2018
Proceedings 21st Euromicro Conference on Digital System Design DSD 2018
xx
Heavyhitter detection using a hardware sketch with the countminCU algorithm
Saavedra A. Hernandez C. Figueroa M.
Bioinformatics (BI)
10.1109/DSD.2018.00022
https://ieeexplore.ieee.org/document/8491793
368
2018
Proceedings 28th Euromicro International Conference on Parallel Distributed and NetworkBased Processing
2018
MinVisited: A Message Routing Protocol for DTN
Veas Castillo Luis Ovando Leon Gabriel Gil Costa Veronica Marin Mauricio
369
2018
Proceedings of the International Symposium on Algorithms and Computation
xxx
Tree Path Majority Data Structures
Gagie Travis He Meng Navarro Gonzalo
Bioinformatics (BI)
10.4230/LIPIcs.ISAAC.2018.68
http://drops.dagstuhl.de/opus/volltexte/2018/10016/pdf/LIPIcsISAAC201868.pdf
370
2018
Reviews in Aquaculture
10
Overview of 3year precommercial seafarming of Macrocystispyrifera along the Chilean coast
Camus C Infante J Buschmann AH
Molecular Genetics Extremophiles and Ecophysiology (MG)
doi: 10.1111/raq.12185
371
2018
revista chilena de infectologia
35
Resistencia a los antimicrobianos en Chile y el paradigma de Una Salud: manejando los riesgos para la salud pública humana y animal resultante del uso de antimicrobianos en la acuicultura del salmón y en medicina
Ana R. Millanao Carolina BarrientosSchaffeld Claudio D. SiegelTike Alexandra Tomova Larisa Ivanova Henry P. Godfrey Humberto J. Dölz Alejandro H. Buschmann Felipe C. Cabello
Molecular Genetics Extremophiles and Ecophysiology (MG)
372
2018
REVISTA CHILENA DE INFECTOLOGIA
35
Antimicrobial resistance in Chile and The One Health paradigm: Dealing with threats to human and veterinary health resulting from antimicrobial use in salmon aquaculture and the clinic
Millanao AR BarrientosSchaffeld C SiegelTike CD Tomova A. Ivanova L Godfrey HP Dolz HJ Buschmann AH Cabello FC
Molecular Genetics Extremophiles and Ecophysiology (MG)
10.4067/s071610182018000300299
373
2018
SeMA Journal
A semilinear system with positivity conditions
Conca Carlos Gormaz Raúl San Martin Jorge
10.1007/s4032401801660
374
2018
Sustainability Science
13
Unpacking factors influencing antimicrobial use in global aquaculture and their implication for management: a review from a systems perspective
Henriksson Patrik J. G. Rico Andreu Troell Max Klinger Dane H. Buschmann Alejandro H. Saksida Sonja Chadag Mohan V. Zhang Wenbo
10.1007/s1162501705118
375
2018
SYSTEMATIC AND APPLIED MICROBIOLOGY
41
Geodermatophilus chilensis sp nov. from soil of the Yungay coreregion of the Atacama Desert Chile
Castro JF Nouioui I Sangal V Trujillo ME MonteroCalasanz MD Rahmani T Bull AT Asenjo JA Andrews BA Goodfellow M
Mathematical Modelling (MM) Protein Engineering (PE)
https://doi.org/10.1016/j.syapm.2018.03.005
https://www.sciencedirect.com/science/article/abs/pii/S0723202018301292?via%3Dihub
376
2018
The Journal of Antibiotics
71
Asenjonamides A–C antibacterial metabolites isolated from Streptomyces asenjonii strain KNN 42.f from an extremehyper arid Atacama Desert soil
Abdelkader Mohamed S. A. Philippon Thomas Asenjo Juan A. Bull Alan T. Goodfellow Michael Ebel Rainer Jaspars Marcel Rateb Mostafa E.
10.1038/s4142901700120
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